Mikhail S. Gelfand

Publications³⁰

• Article Sigalova O., Gelfand M. S. Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction // BMC Genomics. 2019. Vol. 20. No. 1. P. 1-17. doi
• Article Суворова И., Gelfand M. S. Comparative Genomic Analysis of the Regulation of Aromatic Metabolism in Betaproteobacteria // Frontiers in Microbiology. 2019. Vol. 10. P. 1-18. doi
• Article Gelfand M. S. Micro-evolution of three Streptococcus species: selection, antigenic variation, and horizontal gene inflow // BMC Evolutionary Biology. 2019. Vol. 19. No. 1. P. 1-15. doi
• Article Mikhail S. Gelfand Nuclear lamina integrity is required for proper spatial organization of chromatin in Drosophila // Nature Communications. 2019. Т. 10. № 1. С. 1-11. doi
• Article Garushyants S., Beliavskaia A., Malko D., Logacheva M., Rautian M., Gelfand M. S. Comparative Genomic Analysis of Holospora spp., Intranuclear Symbionts of Paramecia // Frontiers in Microbiology. 2018. Vol. 9. Article 738. doi
• Article Gelfand M. S. Comparative genomic analysis of fungal TPP-riboswitches // Fungal Genetics and Biology. 2018. Vol. 114. P. 34-41. doi
• Article Mazin P., Jiang X., Fu N., Han D., Guo M., Gelfand M. S., Khaitovich P. Conservation, evolution, and regulation of splicing during prefrontal cortex development in humans, chimpanzees and macaques // RNA. 2018. P. 585-596. doi
• Article Mazin P., Gelfand M. S. Cooption of heat shock regulatory system for anhydrobiosis in the sleeping chironomid Polypedilum vanderplanki // Proceedings of the National Academy of Sciences of the United States of America. 2018. P. E2477-E2486. doi
• Article Gelfand M. S. Genome rearrangements and phylogeny reconstruction in Yersinia pestis // PeerJ. 2018. Vol. 6. P. 1-13. doi
• Article Gelfand M. S. Genome rearrangements and selection in multi-chromosome bacteria Burkholderia spp. // BMC Genomics. 2018. Vol. 19. No. 1. P. 1-17. doi
• Article Gelfand M. S. Microbiomes of gall-inducing copepod crustaceans from the corals Stylophora pistillata (Scleractinia) and Gorgonia ventalina (Alcyonacea) // Scientific Reports. 2018. Vol. 8. No. 1. P. 1-10. doi
• Article Gelfand M. S. Neanderthal and Denisovan ancestry in Papuans: A functional study // Journal of Bioinformatics and Computational Biology. 2018. Vol. 16. No. 2. P. 1840011-1-1840011-12. doi
• Article Gelfand M. S. Pangenomic Definition of Prokaryotic Species and the Phylogenetic Structure of Prochlorococcus spp // Frontiers in Microbiology. 2018. Vol. 9. P. 1-11. doi
• Article Gelfand M. S. The genes of the sulphoquinovose catabolism in Escherichia coli are also associated with a previously unknown pathway of lactose degradation // Scientific Reports. 2018. Vol. 8. No. 1. P. 1-12. doi
• Article Gelfand M. S. Genome analysis of E. coli isolated from Crohn's disease patients. BMC Genomics // BMC Genomics. 2017. Vol. 18. No. 1. P. 1-17. doi
• Article Gelfand M. S., Kaznadzey А., Shelyakin P. Sugar Lego: Gene composition of bacterial carbohydrate metabolism genomic loci // Biology Direct. 2017. Vol. 12. No. 2. P. 1-14. doi
• Article Ulianov S., Gelfand M. S., Razin S., et a. Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains // Genome Research. 2016. Vol. 26. No. 1. P. 70-84. doi
• Article Evfratov S., Osterman I., Komarova E., Pogorelskaya, A., Rubtsova M., Zatsepin T., Semashko T., Kostryukova E., Mironov A. A., Burnaev E., Krymova E., Gelfand M. S., Govorun V., Bogdanov A., Sergiev P., Dontsova O. Application of sorting and next generation sequencing to study 5'-UTR influence on translation efficiency in Escherichia coli // Nucleic Acids Research. 2016. Vol. 45. No. 6. P. 3487-3502. doi
• Article Ivanenko V., et a., Gelfand M. S., et a., Ferrari F. Changes in segmentation and setation along the anterior/posterior axis of the homonomous trunk limbs of a remipede (Crustacea, Arthropoda) // PeerJ. 2016. Vol. 10. No. 4. P. e2305-1-e2305-20.
• Article Zhang B., Gelfand M. S., Khaitovich P., et a. Changes in snoRNA and snRNA Abundance in the Human, Chimpanzee, Macaque, and Mouse Brain // Genome Biology and Evolution. 2016. Vol. 8. No. 3. P. 840-850. doi
• Article Kalinina A., Suvorikova A., Spokoiny V., Gelfand M. S. Detection of homologous recombination in closely related strains // Journal of Bioinformatics and Computational Biology. 2016. Vol. 14. No. 2. P. 1641001-1-1641001-12. doi
• Article Bondarenko V., Gelfand M. S. Evolution of the Exon-Intron Structure in Ciliate Genomes // Plos One. 2016. Vol. 11. No. 9. P. 1-16. doi
• Article Čuklina J., Gelfand M. S., Evguenieva-Hackenberg E., et a. Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation // BMC Genomics. 2016. Vol. 17. P. 1-19. doi
• Article Kublanov I., et a., Gelfand M. S., Bonch-Osmolovskaya E. Genomic Analysis of Caldithrix abyssi, the Thermophilic Anaerobic Bacterium of the Novel Bacterial Phylum Calditrichaeota // Frontiers in Microbiology. 2016. Vol. 8. P. 195-1-195-16. doi
• Article Flegontov P., et a., Gelfand M. S., et a., Tatarinova T. Genomic study of the Ket: a Paleo-Eskimo-related ethnic group with significant ancient North Eurasian ancestry // Scientific Reports. 2016. Vol. 6. P. 1-12. doi
• Article Khrameeva E., Fudenberg G., Gelfand M. S., Mirny L. History of chromosome rearrangements reflects the spatial organization of yeast chromosomes // Journal of Bioinformatics and Computational Biology. 2016. Vol. 14. No. 2. P. 1641002. doi
• Article Korostelev Y., Zharov I., Mironov A. A., Rakhmaininova A., Gelfand M. S. Identification of Position-Specific Correlations between DNA-Binding Domains and Their Binding Sites. Application to the MerR Family of Transcription Factors // Plos One. 2016. Vol. 11. No. 9. P. 1-23. doi
• Article Tsoy O., Ravcheev D., Čuklina J., Gelfand M. S. Nitrogen fixation and molecular oxygen: Comparative genomic reconstruction of transcription regulation in Alphaproteobacteria // Frontiers in Microbiology. 2016. Vol. 7. P. 1-14. doi
• Article Pirogov S., et a., Gelfand M. S. Recombination Processes and Nonlinear Markov Chains // Journal of Computational Biology. 2016. Vol. 23. No. 9. P. 711-717. doi
• Article Hahn J., Tsoy O. V., Thalmann S., Čuklina J., Gelfand M. S., Evguenieva-Hackenberg E. Small Open Reading Frames, Non-Coding RNAs and Repetitive Elements in Bradyrhizobium japonicum USDA 110 // Plos One. 2016. No. 11(10). P. e0165429-1-e0165429-24. doi